BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B08LP1|AL427438
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1766 0.0
>3x_Contig1509
Length = 8584
Score = 1766 bits (882), Expect = 0.0
Identities = 921/942 (97%), Gaps = 1/942 (0%)
Strand = Plus / Minus
Query: 5 catttagaagatcacaaatatattccgcagcagttatacttgcatatttcatacgtactt 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6165 catttagaagatcacaaatatattccgcagcagtgatacttgcatatttcatacgtactt 6106
Query: 65 gatgcatacgtgaaaaggagcacataatataaacacaagtaggcatatagtgtatgtatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6105 gatgcatacgtgaaaaggagcacataatataaacacaagtaggcatatagtgtatgtatc 6046
Query: 125 amatatgtacagatgtgttctgataaatgacaatyattcgagcttagaagamagttgtya 184
| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
Sbjct: 6045 aaatatgtacagatgtgttctgataaatgacaattattcgagcttagaagaaagttgtta 5986
Query: 185 tctaaaggcttgtcactttttgtttgggtcgtctggtgaactactggaaccaatcttcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5985 tctaaaggcttgtcactttttgtttgggtcgtctggtgaactactggaaccaatcttcaa 5926
Query: 245 tactgamatatcattatctatccaataacacagtgaaaagaaataaaammmaamattcaa 304
|||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 5925 tactgaaatatcattatctatccaataacacagtgaaaagaaataaaaaaaaaaattcaa 5866
Query: 305 tactatgagattaaagatgagtcttcaatagtgaacgatatatagatattgattagcgaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5865 tactatgagattaaagatgagtcttcaatagtgaacgatatatagatattgattagcgaa 5806
Query: 365 tgtgaaaycttcaggmcggtaagtacatcatatcgacgggtagatctataacatcaaggg 424
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5805 tgtgaaatcttcaggacggtaagtacatcatatcgacgggtagatctataacatcaaggg 5746
Query: 425 catacctcctcatttatcatttaatgtcagayttggaaagtgcgtcgaaagacatcgctt 484
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 5745 catacctcctcatttatcatttaatgtcagatttggaaagtgcgttgaaagacatcgctt 5686
Query: 485 atggctcggttgccggtgccatcgcgcaaggtcatcgaatatccatttgatacagtcaaa 544
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5685 atggatcggttgccggtgccatcg-gcaaggtcatcgaatatccatttgatacagtcaaa 5627
Query: 545 gtgcgtctaccaacccaaccagctcatctgtctcctaccacttggtcatgcataagayct 604
|||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 5626 gtgcgtttacaaacccaaccagctcatctgtatcctaccacttggtcatgcataagatct 5567
Query: 605 acttacacggatgagggaatatggaaaggtttttatcagggtatagcgtctccactattt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5566 acttacacggatgagggaatatggaaaggtttttatcagggtatagcgtctccactattt 5507
Query: 665 ggtgctgctttggagaatgcagtgttgttcgtttctttcaatcaatgtactaacttttta 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5506 ggtgctgctttggagaatgcagtgttgttcgtttctttcaatcaatgtactaacttttta 5447
Query: 725 gatgaattcactcaactgaaacctttaacaaagactatttattccggtgcgtttgcaggc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5446 gatgaattcactcaactgaaacctttaacaaagactatttattccggtgcgtttgcaggc 5387
Query: 785 gcctgtgcgagcttcatattgacccctgtagagttagtcaaatgtaaattacaagtgtca 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5386 gcctgtgcgagcttcatattgacccctgtagagttagtcaaatgtaaattacaagtgtca 5327
Query: 845 aatattagcaattcactatcacaaacgacccgccatacaagcgtttggcctactataaaa 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5326 aatattagcaattcactatcacaaacgacccgccatacaagcgtttggcctactataaaa 5267
Query: 905 tctgttatcaaggaaaaaggcttattgggrctatggcagggc 946
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5266 tctgttatcaaggaaaaaggcttattgggactatggcagggc 5225
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5735
Number of Sequences: 1807
Number of extensions: 5735
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)